Here is a little thing that I worked up, its similar/same method as the previous fix for ICE. This one add NDS emulator (DeSmuME).
Instructions: Rename your original Gameboy advance emulator to "gbaemu.exe", ex: "VisualBoyAdvance.exe" to "gbaemu.exe" and extract the NDS folder into the same directory. Add NDS games by placing them into the GBA roms directory.
Download : http://www.mediafire.com/download/z3h482mgk53r2rf/%2BDeSmuME.zip